RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g13820.1 View Network Show in Genome Browser |
| Other Names | Os06g0247800 |
| Description | dynamin, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 7661691-7670035 Nucleotide Length: 2736 |
| Protein-coding | LOC_Os06g13820 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0007267 | cell-cell signaling | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g45480 LOC_Os05g13790 LOC_Os05g13780 |
| Downstream Genes | LOC_Os08g08220 LOC_Os09g03600 LOC_Os07g19470 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g13820.1 |
| Rice Genome Annotation | LOC_Os06g13820.1 |
| Ricechip | LOC_Os06g13820.1 |
| KEGG | osa:4340644 dosa:Os06t0247800-01 |
| Entrez-Gene | 4340644 |