RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os06g14510.1 View Network Show in Genome Browser
Other Names	Os06g0256500
Description	glucose-6-phosphate isomerase, putative, expressed
Gene Attributes	Chromosome: Chr6 CDS Coordinates (5'-3'): 8152235-8159385 Nucleotide Length: 1704
Protein-coding	LOC_Os06g14510

Gene Ontology Classification
GO	Name	Type	Code
GO:0008150	biological_process	Biological Process	IEA
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0005975	carbohydrate metabolic process	Biological Process	IEA
GO:0009056	catabolic process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0006091	generation of precursor metabolites and energy	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0009607	response to biotic stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0005829	cytosol	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g73310 LOC_Os05g01600 LOC_Os01g67860 LOC_Os05g09500 LOC_Os05g45590 LOC_Os05g39310 LOC_Os05g39320 LOC_Os03g18220 LOC_Os04g01740 LOC_Os05g44922 LOC_Os05g33380 More..
Downstream Genes	LOC_Os09g30418 LOC_Os09g30412 LOC_Os09g20820 LOC_Os08g39140 LOC_Os06g37180 LOC_Os06g45710 LOC_Os06g40640 LOC_Os11g06390 LOC_Os07g09890 LOC_Os08g34050 LOC_Os11g29400 More..

miRNA Regulations
miRNAs	osa-miR5156

Pathways
KEGG Pathways	rn00010 rn00030 rn01100 rn01110 rn01120 rn00500 rn00520
Metacyc Pathways	P124-PWY PWY-622 GLUCONEO-PWY PWY-621 PWY-882 GLYCOLYSIS PWY-3801

Database Links
Gramene	LOC_Os06g14510.1
Rice Genome Annotation	LOC_Os06g14510.1
Ricechip	LOC_Os06g14510.1
KEGG	osa:4340677 dosa:Os06t0256500-01
Entrez-Gene	4340677