RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g14550.1 View Network Show in Genome Browser |
| Other Names | Os06g0257200 |
| Description | signal recognition particle 9 kDa protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 8194483-8198052 Nucleotide Length: 312 |
| Protein-coding | LOC_Os06g14550 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g53220 LOC_Os05g04530 LOC_Os02g33450 LOC_Os01g49190 LOC_Os05g47980 LOC_Os02g14929 LOC_Os01g73310 LOC_Os03g19530 LOC_Os03g21950 LOC_Os05g01600 LOC_Os01g40110 More.. |
| Downstream Genes | LOC_Os06g34690 LOC_Os08g09240 LOC_Os09g07900 LOC_Os06g45710 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g14550.1 |
| Rice Genome Annotation | LOC_Os06g14550.1 |
| Ricechip | LOC_Os06g14550.1 |
| KEGG | osa:4340680 dosa:Os06t0257200-01 |
| Entrez-Gene | 4340680 |