RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os06g15250.1 View Network Show in Genome Browser
Other Names
Description	3-ketoacyl-CoA synthase, putative, expressed
Gene Attributes	Chromosome: Chr6 CDS Coordinates (5'-3'): 8645291-8646805 Nucleotide Length: 1515
Protein-coding	LOC_Os06g15250

Gene Ontology Classification
GO	Name	Type	Code
GO:0009653	anatomical structure morphogenesis	Biological Process	IEA
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0016049	cell growth	Biological Process	IEA
GO:0016043	cellular component organization	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0006629	lipid metabolic	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0016740	transferase activity	Molecular Function	IEA
GO:0005783	endoplasmic reticulum	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os03g18590 LOC_Os04g36800 LOC_Os06g09630 LOC_Os02g10320 LOC_Os04g30760 LOC_Os02g30060 LOC_Os03g22950 LOC_Os05g31290 LOC_Os03g63930 LOC_Os03g39860 LOC_Os04g44920 More..
Downstream Genes	LOC_Os07g42420 LOC_Os12g13930 LOC_Os11g31900 LOC_Os09g36860 LOC_Os08g43580 LOC_Os12g34890 LOC_Os07g12150 LOC_Os07g30790 LOC_Os08g40860 LOC_Os09g01620

miRNA Regulations
miRNAs	osa-miR1427

Pathways
Metacyc Pathways	FASYN-INITIAL-PWY FASYN-ELONG-PWY PWY-5080

Database Links
Gramene	LOC_Os06g15250.1
Rice Genome Annotation	LOC_Os06g15250.1
Ricechip	LOC_Os06g15250.1