RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g16280.1 View Network Show in Genome Browser |
| Other Names | Os06g0274100 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 9267068-9280989 Nucleotide Length: 3219 |
| Protein-coding | LOC_Os06g16280 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005635 | nuclear envelope | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g42050 LOC_Os03g15540 LOC_Os03g49420 LOC_Os04g59494 LOC_Os05g28510 LOC_Os03g18350 LOC_Os02g31960 LOC_Os02g43760 LOC_Os01g65260 LOC_Os02g57990 LOC_Os03g59020 More.. |
| Downstream Genes | LOC_Os12g38110 LOC_Os11g47320 LOC_Os11g47130 LOC_Os08g25799 LOC_Os07g38760 LOC_Os09g07510 LOC_Os11g42420 LOC_Os12g44390 LOC_Os06g36700 LOC_Os06g34690 LOC_Os08g04280 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g16280.1 |
| Rice Genome Annotation | LOC_Os06g16280.1 |
| Ricechip | LOC_Os06g16280.1 |
| KEGG | osa:4340740 dosa:Os06t0274100-01 |
| Entrez-Gene | 4340740 |