RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g16350.1 View Network Show in Genome Browser |
| Other Names | Os06g0274800 |
| Description | peroxidase precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 9325990-9328211 Nucleotide Length: 1005 |
| Protein-coding | LOC_Os06g16350 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g61160 LOC_Os03g14170 LOC_Os02g56310 LOC_Os02g41580 LOC_Os03g17350 LOC_Os03g49490 LOC_Os03g57970 |
| Downstream Genes | LOC_Os07g40890 LOC_Os07g40870 LOC_Os07g47210 LOC_Os08g37300 LOC_Os11g31940 LOC_Os08g24790 LOC_Os07g40850 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00680 rn01100 rn01120 rn00360 rn00940 rn01110 |
| Metacyc Pathways | PWY-5461 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g16350.1 |
| Rice Genome Annotation | LOC_Os06g16350.1 |
| Ricechip | LOC_Os06g16350.1 |
| KEGG | osa:4340745 dosa:Os06t0274800-01 |
| Entrez-Gene | 4340745 |