RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g16420.1 View Network Show in Genome Browser |
| Other Names | Os06g0275800 |
| Description | amino acid transporter, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 9396130-9399130 Nucleotide Length: 1347 |
| Protein-coding | LOC_Os06g16420 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g60260 LOC_Os02g01100 LOC_Os05g41610 LOC_Os02g44980 LOC_Os03g25050 LOC_Os04g47780 LOC_Os02g54730 LOC_Os01g56930 LOC_Os02g07760 LOC_Os01g12800 LOC_Os04g38680 More.. |
| Downstream Genes | LOC_Os12g38570 LOC_Os11g28980 LOC_Os07g12770 LOC_Os07g29620 LOC_Os08g38720 LOC_Os09g10820 LOC_Os08g36530 LOC_Os07g44430 LOC_Os09g19734 LOC_Os10g32550 LOC_Os08g36150 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g16420.1 |
| Rice Genome Annotation | LOC_Os06g16420.1 |
| Ricechip | LOC_Os06g16420.1 |
| KEGG | osa:4340751 dosa:Os06t0275800-01 |
| Entrez-Gene | 4340751 |