RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g18000.1 View Network Show in Genome Browser |
| Other Names | Os06g0288100 |
| Description | protein kinase domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 10469299-10471228 Nucleotide Length: 1530 |
| Protein-coding | LOC_Os06g18000 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009838 | abscission | Biological Process | IEA | |
| GO:0008219 | cell death | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g47770 LOC_Os01g74200 LOC_Os01g25386 LOC_Os02g05630 LOC_Os03g58580 LOC_Os02g38230 LOC_Os04g37904 LOC_Os03g16390 LOC_Os04g56450 LOC_Os02g55560 LOC_Os04g58090 More.. |
| Downstream Genes | LOC_Os06g33549 LOC_Os06g48300 LOC_Os07g32380 LOC_Os09g25960 LOC_Os07g12890 LOC_Os12g39300 LOC_Os06g44210 LOC_Os06g33530 LOC_Os11g06780 LOC_Os11g09010 LOC_Os10g02970 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1846c-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g18000.1 |
| Rice Genome Annotation | LOC_Os06g18000.1 |
| Ricechip | LOC_Os06g18000.1 |
| KEGG | osa:4340783 dosa:Os06t0288100-01 |
| Entrez-Gene | 4340783 |