RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g19620.2 View Network Show in Genome Browser |
| Other Names | Os06g0300300 |
| Description | SFT2, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 11184909-11189423 Nucleotide Length: 489 |
| Protein-coding | LOC_Os06g19620 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g47440 LOC_Os03g11100 LOC_Os06g11930 LOC_Os02g11830 LOC_Os02g03450 LOC_Os03g12460 LOC_Os06g02570 LOC_Os05g33390 LOC_Os04g56160 LOC_Os03g56820 LOC_Os06g05180 More.. |
| Downstream Genes | LOC_Os08g15040 LOC_Os10g19190 LOC_Os09g38530 LOC_Os07g40320 LOC_Os07g31370 LOC_Os12g30060 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g19620.2 |
| Rice Genome Annotation | LOC_Os06g19620.2 |
| Ricechip | LOC_Os06g19620.2 |
| KEGG | osa:4340821 dosa:Os06t0300300-01 |
| Entrez-Gene | 4340821 |