RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g20340.2 View Network Show in Genome Browser |
| Other Names | Os06g0308100 |
| Description | dual specificity protein phosphatase, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 11684180-11687915 Nucleotide Length: 609 |
| Protein-coding | LOC_Os06g20340 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g55980 LOC_Os06g06090 LOC_Os03g17700 LOC_Os04g38450 LOC_Os01g62080 LOC_Os03g53400 LOC_Os02g32430 LOC_Os03g26450 LOC_Os03g04410 LOC_Os02g07044 LOC_Os03g01750 More.. |
| Downstream Genes | LOC_Os12g21890 LOC_Os08g06060 LOC_Os10g38950 LOC_Os12g02120 LOC_Os11g02180 LOC_Os12g41500 LOC_Os10g37660 LOC_Os12g07590 LOC_Os07g30300 LOC_Os08g20270 LOC_Os11g17610 More.. |
| Reference | |
|---|---|
| PubMed | 22525239 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g20340.2 |
| Rice Genome Annotation | LOC_Os06g20340.2 |
| Ricechip | LOC_Os06g20340.2 |
| KEGG | osa:4340847 dosa:Os06t0308100-01 |
| Entrez-Gene | 4340847 |