RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g21330.1 View Network Show in Genome Browser |
| Other Names | Os06g0318200 |
| Description | ABB1 - Ankyrin repeat region with 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 12318391-12322832 Nucleotide Length: 1758 |
| Protein-coding | LOC_Os06g21330 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g56200 LOC_Os01g72020 LOC_Os02g47870 LOC_Os01g09800 LOC_Os01g01700 LOC_Os03g55110 LOC_Os04g55030 LOC_Os02g51180 LOC_Os05g01310 LOC_Os03g49770 LOC_Os02g09130 More.. |
| Downstream Genes | LOC_Os12g02030 LOC_Os08g38700 LOC_Os06g31100 LOC_Os11g02070 LOC_Os12g02530 LOC_Os11g02610 LOC_Os06g46240 LOC_Os08g01320 LOC_Os08g07400 LOC_Os12g40780 LOC_Os11g34860 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5496 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g21330.1 |
| Rice Genome Annotation | LOC_Os06g21330.1 |
| Ricechip | LOC_Os06g21330.1 |
| KEGG | osa:4340880 dosa:Os06t0318200-01 |
| Entrez-Gene | 4340880 |