RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g21380.1 View Network Show in Genome Browser |
| Other Names | Os06g0318600 |
| Description | OsCttP3 - Putative C-terminal processing peptidase homologue, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 12345920-12350139 Nucleotide Length: 1572 |
| Protein-coding | LOC_Os06g21380 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g60190 LOC_Os05g40420 LOC_Os03g21260 LOC_Os03g38230 LOC_Os05g49380 LOC_Os04g58900 LOC_Os01g46590 LOC_Os03g32270 LOC_Os04g57440 LOC_Os04g53310 LOC_Os02g41550 More.. |
| Downstream Genes | LOC_Os09g25310 LOC_Os08g06530 LOC_Os11g14170 LOC_Os08g38700 LOC_Os08g31940 LOC_Os12g13824 LOC_Os07g46570 LOC_Os06g43790 LOC_Os08g13320 LOC_Os09g12540 LOC_Os12g32970 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g21380.1 |
| Rice Genome Annotation | LOC_Os06g21380.1 |
| Ricechip | LOC_Os06g21380.1 |
| KEGG | osa:4340883 dosa:Os06t0318600-01 |
| Entrez-Gene | 4340883 |