RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g21470.1 View Network Show in Genome Browser |
| Other Names | Os06g0319600 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 12403412-12410355 Nucleotide Length: 2247 |
| Protein-coding | LOC_Os06g21470 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g18010 LOC_Os03g63590 LOC_Os01g72220 LOC_Os05g46570 LOC_Os01g48210 LOC_Os03g16110 LOC_Os03g22570 LOC_Os02g12570 LOC_Os03g11240 LOC_Os05g30410 LOC_Os04g56760 More.. |
| Downstream Genes | LOC_Os09g39590 LOC_Os10g29560 LOC_Os12g07050 LOC_Os12g38380 LOC_Os06g48310 LOC_Os10g11034 LOC_Os10g06130 LOC_Os12g44390 LOC_Os07g08330 LOC_Os07g47630 LOC_Os10g10990 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00230 rn01100 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g21470.1 |
| Rice Genome Annotation | LOC_Os06g21470.1 |
| Ricechip | LOC_Os06g21470.1 |
| KEGG | osa:4340886 dosa:Os06t0319600-01 |
| Entrez-Gene | 4340886 |