RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g21560.1 View Network Show in Genome Browser |
| Other Names | Os06g0320100 |
| Description | CDK5RAP3, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 12434084-12437478 Nucleotide Length: 1677 |
| Protein-coding | LOC_Os06g21560 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g02650 LOC_Os02g02750 LOC_Os03g23950 LOC_Os04g32330 LOC_Os06g10280 LOC_Os06g01630 LOC_Os02g01500 LOC_Os02g31040 LOC_Os02g07410 LOC_Os05g38520 LOC_Os01g62350 More.. |
| Downstream Genes | LOC_Os08g15040 LOC_Os07g01320 LOC_Os08g01840 LOC_Os06g30460 LOC_Os06g45670 LOC_Os08g45180 LOC_Os07g22720 LOC_Os10g37180 LOC_Os11g14220 LOC_Os12g08260 LOC_Os10g32830 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g21560.1 |
| Rice Genome Annotation | LOC_Os06g21560.1 |
| Ricechip | LOC_Os06g21560.1 |
| KEGG | osa:4340889 dosa:Os06t0320100-01 |
| Entrez-Gene | 4340889 |