RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g21590.1 View Network Show in Genome Browser |
| Other Names | Os06g0320500 |
| Description | chlorophyll A-B binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 12452655-12454197 Nucleotide Length: 726 |
| Protein-coding | LOC_Os06g21590 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g33830 LOC_Os05g48630 LOC_Os02g37060 LOC_Os01g56680 LOC_Os01g31690 LOC_Os03g56670 LOC_Os04g38410 LOC_Os01g52240 LOC_Os04g38600 LOC_Os05g50510 LOC_Os02g06640 More.. |
| Downstream Genes | LOC_Os07g37240 LOC_Os09g30340 LOC_Os07g47640 LOC_Os11g13890 LOC_Os08g02630 LOC_Os07g38960 LOC_Os08g44680 LOC_Os12g23200 LOC_Os09g17740 LOC_Os12g17600 LOC_Os08g06500 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g21590.1 |
| Rice Genome Annotation | LOC_Os06g21590.1 |
| Ricechip | LOC_Os06g21590.1 |
| KEGG | osa:4340892 dosa:Os06t0320500-01 |
| Entrez-Gene | 4340892 |