RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g23160.1 View Network Show in Genome Browser |
| Other Names | Os06g0338900 |
| Description | bacterial transferase hexapeptide domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 13514667-13521729 Nucleotide Length: 1368 |
| Protein-coding | LOC_Os06g23160 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g60790 LOC_Os05g39960 LOC_Os03g58430 LOC_Os03g52460 LOC_Os03g44310 LOC_Os03g21550 LOC_Os03g18510 LOC_Os01g05670 LOC_Os03g22810 LOC_Os01g03070 LOC_Os05g01450 More.. |
| Downstream Genes | LOC_Os07g08660 LOC_Os12g31380 LOC_Os10g25320 LOC_Os07g48300 LOC_Os07g46990 LOC_Os07g07709 LOC_Os11g05562 LOC_Os08g44480 LOC_Os07g03230 LOC_Os12g07220 LOC_Os10g41960 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g23160.1 |
| Rice Genome Annotation | LOC_Os06g23160.1 |
| Ricechip | LOC_Os06g23160.1 |
| KEGG | osa:4340947 dosa:Os06t0338900-01 |
| Entrez-Gene | 4340947 |