RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g23210.1 View Network Show in Genome Browser |
| Other Names | Os06g0339800 |
| Description | ribosomal protein L30 containing protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 13554710-13555313 Nucleotide Length: 345 |
| Protein-coding | LOC_Os06g23210 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g01230 LOC_Os05g33020 LOC_Os01g15290 LOC_Os03g48840 LOC_Os03g34040 LOC_Os03g61260 LOC_Os03g12020 LOC_Os02g46440 LOC_Os05g38580 LOC_Os01g62210 LOC_Os03g11440 More.. |
| Downstream Genes | LOC_Os08g15460 LOC_Os09g17840 LOC_Os09g17830 LOC_Os07g10660 LOC_Os12g42180 LOC_Os08g21840 LOC_Os07g07719 LOC_Os08g27090 LOC_Os09g08890 LOC_Os06g35730 LOC_Os07g07709 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g23210.1 |
| Rice Genome Annotation | LOC_Os06g23210.1 |
| Ricechip | LOC_Os06g23210.1 |
| KEGG | osa:4340949 dosa:Os06t0339800-00 |
| Entrez-Gene | 4340949 |