RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g23430.1 View Network Show in Genome Browser |
| Other Names | Os06g0342100 |
| Description | signal recognition particle 19 kDa protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 13677377-13681849 Nucleotide Length: 411 |
| Protein-coding | LOC_Os06g23430 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g56600 LOC_Os01g66560 LOC_Os05g43390 LOC_Os04g42010 LOC_Os05g06350 LOC_Os04g28180 LOC_Os02g51430 LOC_Os02g28810 LOC_Os01g14950 LOC_Os04g26841 LOC_Os04g59494 More.. |
| Downstream Genes | LOC_Os10g40590 LOC_Os07g47710 LOC_Os07g46170 LOC_Os07g34740 LOC_Os12g38630 LOC_Os07g10150 LOC_Os11g16580 LOC_Os08g18110 LOC_Os12g01390 LOC_Os11g01380 LOC_Os12g18770 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g23430.1 |
| Rice Genome Annotation | LOC_Os06g23430.1 |
| Ricechip | LOC_Os06g23430.1 |
| KEGG | osa:4340957 dosa:Os06t0342100-01 |
| Entrez-Gene | 4340957 |