RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g23460.1 View Network Show in Genome Browser |
| Other Names | Os06g0342500 |
| Description | KH domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 13690553-13697926 Nucleotide Length: 1989 |
| Protein-coding | LOC_Os06g23460 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g38620 LOC_Os02g49080 LOC_Os03g60110 LOC_Os05g34670 LOC_Os02g10080 LOC_Os04g31620 LOC_Os01g66300 LOC_Os03g02420 LOC_Os01g13100 LOC_Os01g57910 LOC_Os02g57640 More.. |
| Downstream Genes | LOC_Os07g07310 LOC_Os07g42900 LOC_Os06g41384 LOC_Os07g12490 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g23460.1 |
| Rice Genome Annotation | LOC_Os06g23460.1 |
| Ricechip | LOC_Os06g23460.1 |
| KEGG | osa:4340961 dosa:Os06t0342500-01 |
| Entrez-Gene | 4340961 |