RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g23684.1 View Network Show in Genome Browser |
| Other Names | Os06g0345200 |
| Description | tyrosine aminotransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 13835593-13839057 Nucleotide Length: 1326 |
| Protein-coding | LOC_Os06g23684 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g08770 LOC_Os02g14110 LOC_Os02g56300 LOC_Os03g14800 LOC_Os01g70380 LOC_Os01g70370 LOC_Os01g70360 LOC_Os02g07160 LOC_Os01g53450 LOC_Os06g19730 LOC_Os02g41670 More.. |
| Downstream Genes | LOC_Os06g35540 LOC_Os10g42090 LOC_Os10g11200 LOC_Os11g31640 LOC_Os10g41150 LOC_Os08g22354 LOC_Os12g19420 LOC_Os09g19734 |
| Reference | |
|---|---|
| PubMed | 18034312 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g23684.1 |
| Rice Genome Annotation | LOC_Os06g23684.1 |
| Ricechip | LOC_Os06g23684.1 |
| KEGG | osa:4340970 dosa:Os06t0345200-02 |
| Entrez-Gene | 4340970 |