RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g23780.1 View Network Show in Genome Browser |
| Other Names | Os06g0346300 |
| Description | glutaryl-CoA dehydrogenase, mitochondrial precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 13892471-13897688 Nucleotide Length: 897 |
| Protein-coding | LOC_Os06g23780 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005777 | peroxisome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g01390 LOC_Os04g32330 LOC_Os01g22520 LOC_Os02g31040 |
| Downstream Genes | LOC_Os07g49520 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00410 rn00071 rn01100 rn00592 rn01040 |
| Metacyc Pathways | PWY-3941 PROPFERM-PWY FAO-PWY PWY-5136 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g23780.1 |
| Rice Genome Annotation | LOC_Os06g23780.1 |
| Ricechip | LOC_Os06g23780.1 |
| KEGG | osa:4340972 dosa:Os06t0346300-00 |
| Entrez-Gene | 4340972 |