RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g23870.1 View Network Show in Genome Browser |
| Other Names | Os06g0347100 |
| Description | acyl-CoA dehydrogenase domain protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 13946793-13951279 Nucleotide Length: 309 |
| Protein-coding | LOC_Os06g23870 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005777 | peroxisome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os07g33300 LOC_Os11g45850 LOC_Os11g45840 LOC_Os11g45820 LOC_Os11g13420 LOC_Os10g08580 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00410 rn00071 rn01100 rn00592 rn01040 |
| Metacyc Pathways | PROPFERM-PWY PWY-3941 FAO-PWY PWY-5136 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g23870.1 |
| Rice Genome Annotation | LOC_Os06g23870.1 |
| Ricechip | LOC_Os06g23870.1 |
| KEGG | osa:4340976 dosa:Os06t0347100-01 |
| Entrez-Gene | 4340976 |