RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g24070.1 View Network Show in Genome Browser |
| Other Names | Os06g0348800 |
| Description | myb-like DNA-binding domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 14078258-14082303 Nucleotide Length: 1368 |
| Protein-coding | LOC_Os06g24070 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g49420 LOC_Os01g46970 |
| Downstream Genes | LOC_Os07g18720 LOC_Os11g01890 |
| Reference | |
|---|---|
| PubMed | 19808806 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g24070.1 |
| Rice Genome Annotation | LOC_Os06g24070.1 |
| Ricechip | LOC_Os06g24070.1 |
| KEGG | osa:4340977 dosa:Os06t0348800-01 |
| Entrez-Gene | 4340977 |