RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g24540.1 View Network Show in Genome Browser |
| Other Names | Os06g0352900 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 14386815-14390244 Nucleotide Length: 2538 |
| Protein-coding | LOC_Os06g24540 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g41080 LOC_Os06g14530 LOC_Os01g72950 LOC_Os03g51030 LOC_Os03g31490 LOC_Os03g02640 LOC_Os03g18890 LOC_Os04g58330 LOC_Os03g04440 LOC_Os02g16680 LOC_Os01g45830 More.. |
| Downstream Genes | LOC_Os12g43660 LOC_Os11g47730 LOC_Os09g31970 LOC_Os08g40180 LOC_Os09g23540 LOC_Os06g51480 LOC_Os10g35180 LOC_Os09g23370 LOC_Os09g35730 LOC_Os10g13670 LOC_Os07g47540 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g24540.1 |
| Rice Genome Annotation | LOC_Os06g24540.1 |
| Ricechip | LOC_Os06g24540.1 |
| KEGG | osa:4340984 dosa:Os06t0352900-01 |
| Entrez-Gene | 4340984 |