RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g24730.1 View Network Show in Genome Browser |
| Other Names | Os06g0354700 |
| Description | hydrolase, alpha/beta fold family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 14526887-14532030 Nucleotide Length: 1461 |
| Protein-coding | LOC_Os06g24730 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g34980 LOC_Os01g66010 LOC_Os01g52010 LOC_Os04g57440 LOC_Os02g49700 LOC_Os01g51980 LOC_Os01g34480 LOC_Os02g53860 LOC_Os03g60380 LOC_Os02g08420 LOC_Os01g61230 More.. |
| Downstream Genes | LOC_Os10g25030 LOC_Os07g12530 LOC_Os08g13320 LOC_Os12g32970 LOC_Os10g36350 LOC_Os08g42590 LOC_Os09g25150 LOC_Os08g34280 LOC_Os09g04050 LOC_Os08g17500 LOC_Os09g08720 More.. |
| Reference | |
|---|---|
| PubMed | 19453447 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g24730.1 |
| Rice Genome Annotation | LOC_Os06g24730.1 |
| Ricechip | LOC_Os06g24730.1 |
| KEGG | osa:4340988 dosa:Os06t0354700-01 |
| Entrez-Gene | 4340988 |