RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g24870.1 View Network Show in Genome Browser |
| Other Names | Os06g0355500 |
| Description | bromodomain domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 14584462-14590175 Nucleotide Length: 1137 |
| Protein-coding | LOC_Os06g24870 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g53720 LOC_Os04g58180 LOC_Os01g39250 LOC_Os04g52960 LOC_Os02g03890 LOC_Os05g01780 LOC_Os01g16110 LOC_Os02g22780 LOC_Os06g03780 LOC_Os02g35010 LOC_Os01g39260 More.. |
| Downstream Genes | LOC_Os07g10350 LOC_Os09g02810 LOC_Os07g06820 LOC_Os07g49270 LOC_Os08g38210 LOC_Os12g07300 LOC_Os10g33680 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g24870.1 |
| Rice Genome Annotation | LOC_Os06g24870.1 |
| Ricechip | LOC_Os06g24870.1 |
| KEGG | osa:4340989 dosa:Os06t0355500-01 |
| Entrez-Gene | 4340989 |