RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g25250.1 View Network Show in Genome Browser |
| Other Names | Os06g0358800 |
| Description | endoribonuclease Dicer, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 14770312-14773944 Nucleotide Length: 900 |
| Protein-coding | LOC_Os06g25250 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g55640 LOC_Os05g49220 LOC_Os02g16709 LOC_Os02g04050 LOC_Os01g67740 LOC_Os02g04080 LOC_Os02g04040 LOC_Os05g41750 LOC_Os02g04060 LOC_Os05g31290 LOC_Os03g22950 More.. |
| Downstream Genes | LOC_Os08g10649 LOC_Os09g28000 LOC_Os11g40500 LOC_Os12g44390 LOC_Os07g12150 LOC_Os08g43580 LOC_Os09g36860 LOC_Os12g34890 LOC_Os11g31900 LOC_Os11g05556 LOC_Os11g05552 More.. |
| Reference | |
|---|---|
| PubMed | 18826656 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g25250.1 |
| Rice Genome Annotation | LOC_Os06g25250.1 |
| Ricechip | LOC_Os06g25250.1 |
| KEGG | osa:4340996 dosa:Os06t0358800-01 |
| Entrez-Gene | 4340996 |