RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g27760.1 View Network Show in Genome Browser |
| Other Names | Os06g0472000 |
| Description | peptide methionine sulfoxide reductase msrB, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 15718516-15721373 Nucleotide Length: 645 |
| Protein-coding | LOC_Os06g27760 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g04370 LOC_Os04g40950 LOC_Os02g38920 LOC_Os02g07490 LOC_Os04g56290 LOC_Os02g49570 LOC_Os03g06190 LOC_Os05g47446 LOC_Os05g49430 LOC_Os04g51390 LOC_Os01g46950 More.. |
| Downstream Genes | LOC_Os11g43900 LOC_Os08g03290 LOC_Os06g45860 LOC_Os06g45590 LOC_Os08g39300 LOC_Os12g32950 LOC_Os07g32890 LOC_Os08g14330 LOC_Os09g15820 LOC_Os10g30100 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g27760.1 |
| Rice Genome Annotation | LOC_Os06g27760.1 |
| Ricechip | LOC_Os06g27760.1 |
| KEGG | osa:4341018 dosa:Os06t0472000-01 |
| Entrez-Gene | 4341018 |