RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g27870.1 View Network Show in Genome Browser |
| Other Names | Os06g0473100 |
| Description | signal recognition particle receptor subunit beta, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 15795376-15796493 Nucleotide Length: 519 |
| Protein-coding | LOC_Os06g27870 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g27450 LOC_Os05g41060 LOC_Os01g59790 LOC_Os03g59740 LOC_Os01g16030 LOC_Os05g49890 LOC_Os02g12740 LOC_Os02g04160 LOC_Os02g37050 LOC_Os03g49480 LOC_Os02g14059 More.. |
| Downstream Genes | LOC_Os08g37444 LOC_Os08g15040 LOC_Os07g42820 LOC_Os07g12200 LOC_Os07g12170 LOC_Os07g29320 LOC_Os11g20384 LOC_Os06g35730 LOC_Os11g48020 LOC_Os07g01150 LOC_Os08g42020 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g27870.1 |
| Rice Genome Annotation | LOC_Os06g27870.1 |
| Ricechip | LOC_Os06g27870.1 |
| KEGG | dosa:Os06t0473100-00 |