RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g27890.1 View Network Show in Genome Browser |
| Other Names | Os06g0473200 |
| Description | STE_MEK_ste7_MAP2K.8 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 15811008-15821844 Nucleotide Length: 1572 |
| Protein-coding | LOC_Os06g27890 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0004871 | signal transducer activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g05630 LOC_Os06g06090 LOC_Os03g17700 LOC_Os04g35700 LOC_Os02g35010 LOC_Os02g55560 LOC_Os04g37904 LOC_Os04g47580 LOC_Os03g02680 LOC_Os04g56450 LOC_Os02g52340 More.. |
| Downstream Genes | LOC_Os11g10100 LOC_Os06g48300 LOC_Os06g33549 LOC_Os08g33488 LOC_Os06g33530 LOC_Os07g32380 LOC_Os12g41180 LOC_Os07g08000 LOC_Os09g10720 LOC_Os10g38950 LOC_Os08g06060 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g27890.1 |
| Rice Genome Annotation | LOC_Os06g27890.1 |
| Ricechip | LOC_Os06g27890.1 |
| KEGG | osa:9267453 dosa:Os06t0473200-01 |
| Entrez-Gene | 9267453 |