RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g29310.2 View Network Show in Genome Browser |
| Other Names | Os06g0487900 |
| Description | ulp1 protease family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 16732927-16745662 Nucleotide Length: 1500 |
| Protein-coding | LOC_Os06g29310 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g51154 LOC_Os02g48100 LOC_Os04g34670 LOC_Os03g32526 LOC_Os03g01970 LOC_Os03g52750 LOC_Os03g51900 LOC_Os03g14580 LOC_Os02g34570 LOC_Os03g07580 LOC_Os01g62040 More.. |
| Downstream Genes | LOC_Os11g36390 LOC_Os08g05880 LOC_Os08g41900 LOC_Os10g29514 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g29310.2 |
| Rice Genome Annotation | LOC_Os06g29310.2 |
| Ricechip | LOC_Os06g29310.2 |
| KEGG | osa:4341072 dosa:Os06t0487900-01 |
| Entrez-Gene | 4341072 |