RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g29790.1 View Network Show in Genome Browser |
| Other Names | Os06g0493600 |
| Description | phosphate transporter 1, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 17130053-17134973 Nucleotide Length: 2583 |
| Protein-coding | LOC_Os06g29790 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007154 | cell communication | Biological Process | IEA | |
| GO:0009991 | response to extracellular stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g17064 LOC_Os03g29250 LOC_Os03g46650 LOC_Os03g61200 LOC_Os05g01310 LOC_Os05g26890 LOC_Os02g31030 LOC_Os02g10780 LOC_Os01g58010 LOC_Os04g32320 LOC_Os02g04710 More.. |
| Downstream Genes | LOC_Os06g40120 LOC_Os07g47590 LOC_Os11g19250 LOC_Os12g32330 LOC_Os09g28590 LOC_Os08g41790 LOC_Os07g01820 LOC_Os10g25310 LOC_Os06g30320 LOC_Os09g32820 LOC_Os08g42390 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g29790.1 |
| Rice Genome Annotation | LOC_Os06g29790.1 |
| Ricechip | LOC_Os06g29790.1 |
| KEGG | osa:4341088 dosa:Os06t0493600-01 |
| Entrez-Gene | 4341088 |