RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g30060.2 View Network Show in Genome Browser |
| Other Names | Os06g0496000 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 17311236-17318694 Nucleotide Length: 2004 |
| Protein-coding | LOC_Os06g30060 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g11050 LOC_Os01g54870 LOC_Os03g08440 LOC_Os03g37970 LOC_Os03g10340 LOC_Os05g49030 LOC_Os01g47660 LOC_Os06g02510 LOC_Os04g45040 LOC_Os05g51640 LOC_Os02g18550 More.. |
| Downstream Genes | LOC_Os06g49740 LOC_Os12g21798 LOC_Os12g38000 LOC_Os07g10660 LOC_Os07g01870 LOC_Os10g30580 LOC_Os08g22354 LOC_Os07g42450 LOC_Os06g37160 LOC_Os07g08330 LOC_Os08g42910 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g30060.2 |
| Rice Genome Annotation | LOC_Os06g30060.2 |
| Ricechip | LOC_Os06g30060.2 |
| KEGG | osa:4341099 dosa:Os06t0496000-01 |
| Entrez-Gene | 4341099 |