RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g30380.1 View Network Show in Genome Browser |
| Other Names | Os06g0498900 |
| Description | GTP binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 17550089-17553470 Nucleotide Length: 2046 |
| Protein-coding | LOC_Os06g30380 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g52640 LOC_Os05g35540 LOC_Os03g60180 LOC_Os01g53150 LOC_Os01g27730 LOC_Os03g51840 LOC_Os05g49220 LOC_Os03g13000 LOC_Os05g28940 LOC_Os03g56840 LOC_Os01g61320 More.. |
| Downstream Genes | LOC_Os11g41910 LOC_Os12g09570 LOC_Os08g31460 LOC_Os12g42370 LOC_Os11g38020 LOC_Os08g10649 LOC_Os11g47800 LOC_Os07g47300 LOC_Os07g43470 LOC_Os08g09940 LOC_Os10g36860 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g30380.1 |
| Rice Genome Annotation | LOC_Os06g30380.1 |
| Ricechip | LOC_Os06g30380.1 |
| KEGG | osa:4341108 dosa:Os06t0498900-01 |
| Entrez-Gene | 4341108 |