RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g30750.1 View Network Show in Genome Browser |
| Other Names | Os06g0503400 |
| Description | reticulon domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 17836886-17840919 Nucleotide Length: 798 |
| Protein-coding | LOC_Os06g30750 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g51900 LOC_Os02g16620 LOC_Os02g55480 LOC_Os05g39050 LOC_Os05g38740 LOC_Os04g49420 LOC_Os03g02780 LOC_Os02g45940 LOC_Os01g61920 LOC_Os05g45050 LOC_Os01g53520 More.. |
| Downstream Genes | LOC_Os07g06560 LOC_Os10g39410 LOC_Os09g38020 LOC_Os09g26340 LOC_Os07g36500 LOC_Os08g18110 LOC_Os08g13030 LOC_Os08g12960 LOC_Os10g08840 LOC_Os10g08550 LOC_Os08g13000 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g30750.1 |
| Rice Genome Annotation | LOC_Os06g30750.1 |
| Ricechip | LOC_Os06g30750.1 |
| KEGG | osa:4341121 dosa:Os06t0503400-01 |
| Entrez-Gene | 4341121 |