RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g31100.1 View Network Show in Genome Browser |
| Other Names | Os06g0507400 |
| Description | E1-BTB2 - Bric-a-Brac, Tramtrack, and Broad Complex domain with E1 subfamily conserved sequence, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 18080929-18086700 Nucleotide Length: 1611 |
| Protein-coding | LOC_Os06g31100 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g21330 LOC_Os01g56200 LOC_Os01g72020 LOC_Os05g33050 LOC_Os03g57854 LOC_Os01g64280 LOC_Os04g51920 LOC_Os03g29240 LOC_Os02g53670 LOC_Os03g29190 LOC_Os06g08900 More.. |
| Downstream Genes | LOC_Os07g46160 LOC_Os07g01140 LOC_Os12g02030 LOC_Os08g38700 LOC_Os07g15490 LOC_Os11g02070 LOC_Os12g02530 LOC_Os11g02610 LOC_Os08g01320 LOC_Os06g46240 LOC_Os12g37570 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR414 osa-miR5837.2 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g31100.1 |
| Rice Genome Annotation | LOC_Os06g31100.1 |
| Ricechip | LOC_Os06g31100.1 |
| KEGG | osa:4341137 dosa:Os06t0507400-01 |
| Entrez-Gene | 4341137 |