RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g33210.1 View Network Show in Genome Browser |
| Other Names | Os06g0523400 |
| Description | UAA transporter family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 19338477-19344723 Nucleotide Length: 969 |
| Protein-coding | LOC_Os06g33210 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g23420 LOC_Os02g36390 LOC_Os05g03070 LOC_Os01g54580 LOC_Os05g02490 LOC_Os06g08860 LOC_Os03g02670 LOC_Os02g40030 LOC_Os03g17740 LOC_Os05g23440 LOC_Os06g05980 More.. |
| Downstream Genes | LOC_Os06g39260 LOC_Os09g12600 LOC_Os08g25624 LOC_Os08g42720 LOC_Os09g33830 LOC_Os08g18044 LOC_Os07g34006 LOC_Os07g33954 LOC_Os07g33910 LOC_Os08g08840 LOC_Os06g46380 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g33210.1 |
| Rice Genome Annotation | LOC_Os06g33210.1 |
| Ricechip | LOC_Os06g33210.1 |
| KEGG | osa:4341175 dosa:Os06t0523400-01 |
| Entrez-Gene | 4341175 |