RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g33640.1 View Network Show in Genome Browser |
| Other Names | Os06g0527800 |
| Description | CAPIP1, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 19581998-19585408 Nucleotide Length: 621 |
| Protein-coding | LOC_Os06g33640 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0004872 | receptor activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g26400 LOC_Os05g26386 LOC_Os05g26377 LOC_Os05g26368 LOC_Os05g26359 LOC_Os05g26350 LOC_Os02g25640 LOC_Os02g15090 LOC_Os03g55740 LOC_Os06g31070 LOC_Os06g31060 More.. |
| Downstream Genes | LOC_Os07g12080 LOC_Os07g11380 LOC_Os07g11360 LOC_Os07g11630 LOC_Os07g10580 LOC_Os07g10570 LOC_Os07g11650 LOC_Os07g11510 LOC_Os11g37270 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g33640.1 |
| Rice Genome Annotation | LOC_Os06g33640.1 |
| Ricechip | LOC_Os06g33640.1 |
| KEGG | osa:4341193 dosa:Os06t0527800-01 |
| Entrez-Gene | 4341193 |