RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g33720.1 View Network Show in Genome Browser |
| Other Names | Os06g0528700 |
| Description | flavin-containing monooxygenase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 19619923-19621610 Nucleotide Length: 1458 |
| Protein-coding | LOC_Os06g33720 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g05680 LOC_Os01g72980 LOC_Os01g51320 LOC_Os03g06740 LOC_Os01g22520 LOC_Os05g06750 LOC_Os04g59630 LOC_Os02g47800 LOC_Os02g17700 LOC_Os02g47790 LOC_Os06g22140 More.. |
| Downstream Genes | LOC_Os11g05970 LOC_Os08g05570 LOC_Os09g19560 LOC_Os12g43590 LOC_Os08g08840 LOC_Os08g44340 LOC_Os09g39380 LOC_Os10g28000 LOC_Os10g18220 LOC_Os08g43190 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5809 osa-miR2927 |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-5046 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g33720.1 |
| Rice Genome Annotation | LOC_Os06g33720.1 |
| Ricechip | LOC_Os06g33720.1 |
| KEGG | osa:4341196 dosa:Os06t0528700-01 |
| Entrez-Gene | 4341196 |