RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g34690.1 View Network Show in Genome Browser |
| Other Names | Os06g0538000 |
| Description | T-complex protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 20158641-20165624 Nucleotide Length: 1677 |
| Protein-coding | LOC_Os06g34690 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g05470 LOC_Os03g42220 LOC_Os04g46620 LOC_Os06g09688 LOC_Os06g09679 LOC_Os02g54060 LOC_Os05g48290 LOC_Os03g25050 LOC_Os02g22780 LOC_Os03g16920 LOC_Os03g59020 More.. |
| Downstream Genes | LOC_Os06g36700 LOC_Os11g40140 LOC_Os09g26730 LOC_Os06g47320 LOC_Os10g41710 LOC_Os07g44740 LOC_Os07g08729 LOC_Os10g37060 LOC_Os11g47760 LOC_Os10g26050 LOC_Os10g29560 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g34690.1 |
| Rice Genome Annotation | LOC_Os06g34690.1 |
| Ricechip | LOC_Os06g34690.1 |
| KEGG | osa:4341219 dosa:Os06t0538000-01 |
| Entrez-Gene | 4341219 |