RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g34790.1 View Network Show in Genome Browser |
| Other Names | Os06g0538900 |
| Description | DUF538 domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 20223849-20224795 Nucleotide Length: 498 |
| Protein-coding | LOC_Os06g34790 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g12030 LOC_Os05g43174 LOC_Os04g33990 LOC_Os03g20500 LOC_Os05g03450 LOC_Os05g35340 LOC_Os03g58110 LOC_Os06g05550 LOC_Os04g40730 LOC_Os01g25540 LOC_Os01g04710 More.. |
| Downstream Genes | LOC_Os10g40420 LOC_Os09g35630 LOC_Os09g39410 LOC_Os11g13410 LOC_Os12g04410 LOC_Os11g30560 LOC_Os12g34524 LOC_Os11g39209 LOC_Os11g30360 LOC_Os11g02350 LOC_Os12g38360 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g34790.1 |
| Rice Genome Annotation | LOC_Os06g34790.1 |
| Ricechip | LOC_Os06g34790.1 |
| KEGG | osa:4341223 dosa:Os06t0538900-01 |
| Entrez-Gene | 4341223 |