RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g34830.1 View Network Show in Genome Browser |
| Other Names | Os06g0539400 |
| Description | amino acid permease family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 20251477-20253967 Nucleotide Length: 1791 |
| Protein-coding | LOC_Os06g34830 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g42234 LOC_Os03g45170 LOC_Os03g37984 LOC_Os02g47210 LOC_Os05g05230 LOC_Os01g71720 |
| Downstream Genes | LOC_Os08g23440 LOC_Os10g30090 LOC_Os12g42850 LOC_Os08g25200 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g34830.1 |
| Rice Genome Annotation | LOC_Os06g34830.1 |
| Ricechip | LOC_Os06g34830.1 |
| KEGG | osa:4341225 dosa:Os06t0539400-01 |
| Entrez-Gene | 4341225 |