RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g34870.1 View Network Show in Genome Browser |
| Other Names | Os06g0540050,Os06g0539900 |
| Description | Zinc finger, C3HC4 type domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 20276501-20281207 Nucleotide Length: 1074 |
| Protein-coding | LOC_Os06g34870 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g03100 |
| Downstream Genes | LOC_Os08g01920 LOC_Os09g07900 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5809 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g34870.1 |
| Rice Genome Annotation | LOC_Os06g34870.1 |
| Ricechip | LOC_Os06g34870.1 |
| KEGG | dosa:Os06t0540050-00 |