RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g35490.1 View Network Show in Genome Browser |
| Other Names | Os06g0547100 |
| Description | peroxidase precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 20688528-20691745 Nucleotide Length: 981 |
| Protein-coding | LOC_Os06g35490 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g05470 LOC_Os04g46620 LOC_Os02g22780 LOC_Os02g14929 LOC_Os03g42220 LOC_Os03g59020 |
| Downstream Genes | LOC_Os06g47320 LOC_Os06g36700 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2099-3p |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-5461 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g35490.1 |
| Rice Genome Annotation | LOC_Os06g35490.1 |
| Ricechip | LOC_Os06g35490.1 |
| KEGG | osa:4341248 dosa:Os06t0547100-00 |
| Entrez-Gene | 4341248 |