RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g35530.1 View Network Show in Genome Browser |
| Other Names | Os06g0547900 |
| Description | CGMC_GSK.8 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 20717740-20724744 Nucleotide Length: 1212 |
| Protein-coding | LOC_Os06g35530 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g05630 LOC_Os04g37904 LOC_Os06g33549 LOC_Os04g56450 LOC_Os06g33530 LOC_Os02g55560 LOC_Os02g15594 LOC_Os06g05660 LOC_Os03g49730 LOC_Os04g52000 LOC_Os05g43570 More.. |
| Downstream Genes | LOC_Os06g48300 LOC_Os07g32380 LOC_Os06g44210 LOC_Os10g39540 LOC_Os12g41180 LOC_Os07g08000 LOC_Os07g48290 LOC_Os12g19290 LOC_Os06g39760 LOC_Os10g33640 LOC_Os12g03990 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g35530.1 |
| Rice Genome Annotation | LOC_Os06g35530.1 |
| Ricechip | LOC_Os06g35530.1 |
| KEGG | osa:4341251 dosa:Os06t0547900-01 |
| Entrez-Gene | 4341251 |