RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g35910.1 View Network Show in Genome Browser |
| Other Names | Os06g0552400 |
| Description | FYVE zinc finger domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 20946144-20952748 Nucleotide Length: 1650 |
| Protein-coding | LOC_Os06g35910 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0008289 | lipid binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g02970 LOC_Os01g69210 LOC_Os01g62870 LOC_Os03g61950 LOC_Os04g53720 LOC_Os01g57110 LOC_Os04g41490 LOC_Os01g19760 LOC_Os03g19520 LOC_Os05g19270 LOC_Os02g44520 More.. |
| Downstream Genes | LOC_Os09g39420 LOC_Os08g08220 LOC_Os09g33980 LOC_Os12g07050 LOC_Os11g07500 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR159c osa-miR159d osa-miR159e |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g35910.1 |
| Rice Genome Annotation | LOC_Os06g35910.1 |
| Ricechip | LOC_Os06g35910.1 |
| KEGG | osa:4341271 dosa:Os06t0552400-02 |
| Entrez-Gene | 4341271 |