RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g35930.1 View Network Show in Genome Browser |
| Other Names | Os06g0552700 |
| Description | aquaporin protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 20960706-20961819 Nucleotide Length: 822 |
| Protein-coding | LOC_Os06g35930 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g40870 LOC_Os04g55410 LOC_Os02g32430 LOC_Os03g16670 LOC_Os02g41550 LOC_Os01g48990 LOC_Os06g18830 LOC_Os01g12800 LOC_Os04g01740 LOC_Os03g21620 |
| Downstream Genes | LOC_Os07g30300 LOC_Os10g42250 LOC_Os09g30418 LOC_Os09g30412 LOC_Os08g39140 LOC_Os07g33850 LOC_Os09g30150 LOC_Os07g48290 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g35930.1 |
| Rice Genome Annotation | LOC_Os06g35930.1 |
| Ricechip | LOC_Os06g35930.1 |
| KEGG | dosa:Os06t0552700-01 |