RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g35940.1 View Network Show in Genome Browser |
| Other Names | Os06g0552900 |
| Description | osFTL12 FT-Like12 homologous to Flowering Locus T gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 20971626-20974233 Nucleotide Length: 522 |
| Protein-coding | LOC_Os06g35940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0008289 | lipid binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g51080 LOC_Os04g01600 LOC_Os03g13300 LOC_Os01g71300 LOC_Os04g37460 LOC_Os06g06090 LOC_Os03g17700 LOC_Os05g25310 LOC_Os01g32660 LOC_Os03g49230 LOC_Os03g02680 More.. |
| Downstream Genes | LOC_Os08g36320 LOC_Os11g17610 LOC_Os10g37660 LOC_Os12g12860 LOC_Os07g44710 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g35940.1 |
| Rice Genome Annotation | LOC_Os06g35940.1 |
| Ricechip | LOC_Os06g35940.1 |
| KEGG | osa:4341272 dosa:Os06t0552900-00 |
| Entrez-Gene | 4341272 |