RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g36160.1 View Network Show in Genome Browser |
| Other Names | Os06g0555400 |
| Description | 40S ribosomal protein S24, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 21163218-21167192 Nucleotide Length: 417 |
| Protein-coding | LOC_Os06g36160 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g55974 LOC_Os02g06700 LOC_Os02g33140 LOC_Os01g67134 LOC_Os04g39700 LOC_Os02g27760 LOC_Os04g51630 LOC_Os05g11710 LOC_Os02g14059 LOC_Os03g18570 LOC_Os03g18580 More.. |
| Downstream Genes | LOC_Os08g02410 LOC_Os08g02400 LOC_Os07g10720 LOC_Os10g27190 LOC_Os12g38000 LOC_Os08g13690 LOC_Os07g08330 LOC_Os07g08660 LOC_Os07g42950 LOC_Os08g10608 LOC_Os08g39500 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g36160.1 |
| Rice Genome Annotation | LOC_Os06g36160.1 |
| Ricechip | LOC_Os06g36160.1 |
| KEGG | osa:4341282 dosa:Os06t0555400-01 |
| Entrez-Gene | 4341282 |