RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g36590.1 View Network Show in Genome Browser |
| Other Names | Os06g0561200 |
| Description | transporter, monovalent cation:proton antiporter-2 family, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 21493134-21501374 Nucleotide Length: 1884 |
| Protein-coding | LOC_Os06g36590 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g70580 LOC_Os05g30454 LOC_Os06g09930 LOC_Os01g25440 LOC_Os04g42840 LOC_Os02g07120 |
| Downstream Genes | LOC_Os12g44300 LOC_Os12g44360 LOC_Os09g11450 LOC_Os09g30446 LOC_Os08g08840 LOC_Os10g17770 LOC_Os10g38980 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5534a |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g36590.1 |
| Rice Genome Annotation | LOC_Os06g36590.1 |
| Ricechip | LOC_Os06g36590.1 |
| KEGG | osa:4341306 dosa:Os06t0561200-01 |
| Entrez-Gene | 4341306 |